{
  "_id": "6a1edc1ab401979e7340fc3f",
  "Package": "LSAMBA",
  "Type": "Package",
  "Title": "Lasso-SAMBA Algorithm",
  "Version": "2024.1.1",
  "Authors@R": "c(person(given = \"Auriane\",\nfamily = \"Gabaut\",\nrole = c(\"aut\", \"cre\"),\nemail = \"aurianegabaut@gmail.com\"),\nperson(given = \"Mélanie\",\nfamily = \"Prague\",\nrole = \"aut\"),\nperson(given = \"Marc\",\nfamily = \"Lavielle\",\nrole = \"aut\",\ncomment = \"for former code of Rsmlx and connectors\"))",
  "Maintainer": "Auriane Gabaut <aurianegabaut@gmail.com>",
  "Description": "Provides a lasso-based method for building mechanistic\nmodels using the SAMBA algorithm (Stochastic Approximation for\nModel Building Algorithm) (M Prague, M Lavielle (2022)\n<doi:10.1002/psp4.12742>). The package extends the 'Rsmlx'\npackage (version 2024.1.0) to better handle high-dimensional\ndata. It relies on the 'Monolix' software (version 2024R1; see\n(<https://monolixsuite.slp-software.com/monolix/2024R1/>),\nwhich must be installed beforehand.",
  "SystemRequirements": "'Monolix'\n(<https://monolixsuite.slp-software.com/monolix/2024R1/>)",
  "License": "GPL (>= 3)",
  "Encoding": "UTF-8",
  "RoxygenNote": "7.3.2",
  "Roxygen": "list(markdown = TRUE)",
  "Config/pak/sysreqs": "cmake libglpk-dev libicu-dev libxml2-dev",
  "Repository": "https://aurianegbt.r-universe.dev",
  "Date/Publication": "2026-01-19 15:43:02 UTC",
  "RemoteUrl": "https://github.com/aurianegbt/lsamba",
  "RemoteRef": "HEAD",
  "RemoteSha": "748e14045749712cf44c3422b7cda102fbeb8894",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-20 08:38:11 UTC",
    "User": "root"
  },
  "Author": "Auriane Gabaut [aut, cre],\nMélanie Prague [aut],\nMarc Lavielle [aut] (for former code of Rsmlx and connectors)",
  "MD5sum": "545f2b0af2919e0ba0337acaf4879602",
  "_user": "aurianegbt",
  "_type": "src",
  "_file": "LSAMBA_2024.1.1.tar.gz",
  "_fileid": "202494a271d7730ab6600db935a74642b2dd9926f05df10a00de51a2057d0b96",
  "_filesize": 124908,
  "_sha256": "202494a271d7730ab6600db935a74642b2dd9926f05df10a00de51a2057d0b96",
  "_created": "2026-05-20T08:38:11.000Z",
  "_published": "2026-06-02T13:35:22.734Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79083041060,
      "time": 139,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7105229010"
    },
    {
      "job": 79083040017,
      "time": 143,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7105230418"
    },
    {
      "job": 79083040911,
      "time": 217,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7105246127"
    },
    {
      "job": 79083039935,
      "time": 150,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7105224264"
    },
    {
      "job": 79083039152,
      "time": 204,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7105181371"
    },
    {
      "job": 79083039304,
      "time": 115,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7359189302"
    },
    {
      "job": 79083040872,
      "time": 94,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "NOTE",
      "artifact": "7105213745"
    },
    {
      "job": 79083041269,
      "time": 90,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "NOTE",
      "artifact": "7105211743"
    },
    {
      "job": 79083040960,
      "time": 98,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "NOTE",
      "artifact": "7105215501"
    }
  ],
  "_buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/aurianegbt/lsamba",
  "_commit": {
    "id": "748e14045749712cf44c3422b7cda102fbeb8894",
    "author": "Auriane Gabaut <122619227+aurianegbt@users.noreply.github.com>",
    "committer": "Auriane Gabaut <122619227+aurianegbt@users.noreply.github.com>",
    "message": "Merge branch 'master' of https://github.com/aurianegbt/LSAMBA\n",
    "time": 1768837382
  },
  "_maintainer": {
    "name": "Auriane Gabaut",
    "email": "aurianegabaut@gmail.com",
    "login": "aurianegbt",
    "description": "",
    "uuid": 122619227
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 2.10",
      "role": "Depends"
    },
    {
      "package": "Rsmlx",
      "version": ">= 2024.1.0",
      "role": "Depends"
    },
    {
      "package": "foreach",
      "role": "Depends"
    },
    {
      "package": "doParallel",
      "role": "Imports"
    },
    {
      "package": "dplyr",
      "role": "Imports"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "grDevices",
      "role": "Imports"
    },
    {
      "package": "latex2exp",
      "role": "Imports"
    },
    {
      "package": "MASS",
      "role": "Imports"
    },
    {
      "package": "parallel",
      "role": "Imports"
    },
    {
      "package": "sharp",
      "role": "Imports"
    },
    {
      "package": "stringr",
      "role": "Imports"
    }
  ],
  "_owner": "aurianegbt",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-04",
      "n": 2
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "aurianegbt",
      "count": 53,
      "uuid": 122619227
    }
  ],
  "_userbio": {
    "uuid": 122619227,
    "type": "user",
    "name": "Auriane Gabaut "
  },
  "_downloads": {
    "count": 213,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/LSAMBA"
  },
  "_devurl": "https://github.com/aurianegbt/lsamba",
  "_searchresults": 1,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/LSAMBA.html",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/aurianegbt/lsamba",
  "_realowner": "aurianegbt",
  "_cranurl": true,
  "_releases": [
    {
      "version": "2024.1.0",
      "date": "2025-05-20"
    },
    {
      "version": "2024.1.1",
      "date": "2026-01-19"
    }
  ],
  "_exports": [
    "buildmlx",
    "getMLXdir"
  ],
  "_help": [
    {
      "page": "buildmlx",
      "title": "buildmlx: Automatic statistical model building",
      "topics": [
        "buildmlx"
      ]
    },
    {
      "page": "getMLXdir",
      "title": "Get monolix demo project path.",
      "topics": [
        "getMLXdir"
      ]
    }
  ],
  "_readme": "https://github.com/aurianegbt/lsamba/raw/HEAD/README.md",
  "_rundeps": [
    "abind",
    "audio",
    "beepr",
    "cli",
    "codetools",
    "cpp11",
    "digest",
    "doParallel",
    "dplyr",
    "fake",
    "farver",
    "foreach",
    "future",
    "future.apply",
    "generics",
    "ggplot2",
    "glassoFast",
    "glmnet",
    "globals",
    "glue",
    "gridExtra",
    "gtable",
    "igraph",
    "isoband",
    "iterators",
    "labeling",
    "latex2exp",
    "lattice",
    "lifecycle",
    "listenv",
    "magrittr",
    "MASS",
    "Matrix",
    "mclust",
    "nloptr",
    "parallelly",
    "pillar",
    "pkgconfig",
    "plotrix",
    "purrr",
    "R6",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "Rdpack",
    "rlang",
    "Rsmlx",
    "S7",
    "scales",
    "shape",
    "sharp",
    "stringi",
    "stringr",
    "survival",
    "tibble",
    "tidyr",
    "tidyselect",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr"
  ],
  "_score": 2.6989700043360187,
  "_indexed": true,
  "_nocasepkg": "lsamba",
  "_universes": [
    "aurianegbt"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "2024.1.1",
      "date": "2026-05-20T08:40:19.000Z",
      "distro": "noble",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "7595fdba05e040126624f1a7747b8fa7c5a87814dafe75b5347056836f619459",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "2024.1.1",
      "date": "2026-05-20T08:40:23.000Z",
      "distro": "noble",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "abcde2d7081fec79f8065355419b86b8eb67e65af1e1d4c2e6bcf6c361c48e61",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "2024.1.1",
      "date": "2026-05-20T08:41:08.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "5fced74f489f69d5ae99c85ae84b1d5debfa9656f8eeb01920b25550a6fa73c6",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "2024.1.1",
      "date": "2026-05-20T08:40:12.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "536316fe997825056c0760f0d5f90697d8729d3fb77e4ffd3d021e92602626b3",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "2024.1.1",
      "date": "2026-05-20T08:39:30.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "cfd933a98b6f0058eec443c6015a357915b348500ebf68dc440624fecd08f668",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "2024.1.1",
      "date": "2026-05-20T08:39:26.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "9b10d3cf83009990b99f70f6ca4d8970b4b32f4e041beeed1a19f0142d23b41d",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "2024.1.1",
      "date": "2026-05-20T08:39:28.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "a5378e3da0d30e4c9700542ea8752784ca7d7e5bc05a16b5153c64f33ac5586a",
      "status": "success",
      "check": "NOTE",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "2024.1.1",
      "date": "2026-06-02T13:34:24.000Z",
      "commit": "748e14045749712cf44c3422b7cda102fbeb8894",
      "fileid": "4f4185f48a6f6858bbd3609de4814c5480af174820a4a2f9637c11b13be74836",
      "status": "success",
      "buildurl": "https://github.com/r-universe/aurianegbt/actions/runs/26151147305"
    }
  ]
}